Publications | Shaun Wilkinson

aphid: an R package for analysis with profile hidden Markov models.

Elevated Symbiodiniaceae richness at Atauro Island (Timor-Leste): a highly biodiverse reef system.

Taxonomic identification of environmental DNA with informatic sequence classification trees.

Intra-genomic variation in Symbiodinium correlates negatively with photosynthetic efficiency and coral host performance.

phylogram: an R package for phylogenetic analysis with nested lists

The distribution of intra-genomically variable dinoflagellate symbionts at Lord Howe Island, Australia.

Intra-genomic variation in symbiotic dinoflagellates: recent divergence or recombination between lineages?